Whole-system duct and dryer vent check with before-and-after photos - you see exactly what came out of your vents
That "$99 whole-house special" is a bait ad - the real number appears once they are in your hallway, or the "clean" is a shop-vac at the register. We photograph the inside of your ducts before and after instead.
Fast, Reliable Air Duct Cleaning Across Bonita Springs
Air duct cleaning in Bonita Springs costs between $450 and $1,100 for a full single-family system, with most homeowners paying $650 to $850. The price we quote you is the price you pay, per Haven Standard Clause 1. If you’re in Pelican Landing, Bonita Bay, Spanish Wells, or anywhere along the Imperial River corridor, you already know this market has a specific problem: Hurricane Ian’s storm surge pushed brackish water into thousands of attic flex duct systems, and many sat vacant through multiple humid summers while owners were up north. We clean what can be cleaned, document what can’t, and give you a written price before a single panel comes off. Call (806) 606-6902.
Why CleanRun Air Duct Cleaning Is Bonita Springs’s Preferred Air Duct Cleaning Company
CleanRun has been independently owned and operated since 2013, with 52,000+ homes served and a written price on every single job before work starts. That’s not a marketing line. It’s Haven Standard Clause 1 and it applies to your house in Bonita Springs the same way it applies to every home we touch. Our Air Duct Cleaning team works in Bonita Springs weekly, which means we know the difference between normal dust accumulation and the specific contamination profile that comes from brackish floodwater exposure followed by 130°F attic heat for six consecutive months.
The customer we hear from most in Bonita Springs is a snowbird who returned in November, turned on the AC, and smelled something wrong. They’d paid top dollar for a home in a master-planned gated community and assumed post-Ian remediation had been handled. It almost never was. The crews that came through after the storm were doing triage: carpet removal, drywall cuts, blower motor replacements. Nobody opened the flex runs. Nobody checked the supply boots. That’s the work we do, and we photograph every inch of it before and after so you can see what was actually inside your ducts.
Our technicians are background-checked, uniformed, and identified by name before arrival. We carry license information on the page, not buried in a footer, and every job ends with a Documented Photo Record of every duct run as a standard deliverable. When you call (806) 606-6902, you get a live person. Always.
Our Air Duct Cleaning Services in Bonita Springs

Residential Duct Cleaning
Most Bonita Springs homes use flex duct running through unconditioned attic spaces that hit 130°F regularly between May and October. That heat degrades duct liner and joint seals faster than in temperate markets, and when the AC runs less because nobody’s home, the interior of those ducts becomes a humidity trap. We clean the full run: plenum, trunk lines, every branch, every register, using professional-grade negative-pressure extraction so whatever comes loose gets pulled out of the system, not blown into your living room.

Commercial Duct Cleaning
Bonita Springs has a steady commercial base along U.S. 41 and the Bonita Beach Road corridor: small offices, medical suites, and retail storefronts that share the same post-Ian contamination profile as residential properties. We schedule commercial work with written scope documents and completion photo records, which property managers and insurers both require. If your building sat partially vacant after the storm or runs reduced AC hours in the off-season, the duct interiors need a look before employees start reporting respiratory issues.

Supply Duct Cleaning
Supply ducts carry conditioned air from your air handler to each room. In Bonita Springs homes that took floodwater during Ian, supply boots and the first several feet of flex run off the plenum were the most common contact points for brackish water. That residue dries, then re-aerosolizes when the blower kicks on. We clean supply runs and inspect boots for corrosion and seal failure, documenting what we find with a camera before and after so you can see the difference between a cleaned surface and one that needs replacement.

Return Duct Cleaning
Return ducts bring air back to the air handler to be reconditioned. In snowbird homes that sat vacant from May through October, return runs pull air from the house through a filter that may not have been changed in a year or more. We regularly find returns in Bonita Springs holding so much debris that static pressure increases and the blower works harder than it should. A return-side cleaning restores proper airflow and gives your AC system a mechanical break it hasn’t had since before the storm.

Full System Cleaning
This is the service we recommend most often in Bonita Springs after Ian. A full system clean covers the supply and return runs, the air handler interior, the blower motor housing, the evaporator coil, and the plenum. Skipping any one of those leaves a contamination source that re-seeds everything else within weeks. We’ve watched homeowners pay for a “duct cleaning” that only touched the visible register openings, then call us two months later because the musty odor never left. The problem wasn’t the cleaning. It was the scope.

Video Inspection
Before we quote any cleaning in Bonita Springs, we run a camera through the duct runs. Not just to see how dirty they are. To see whether they’re worth cleaning at all. Water-damaged flex duct liner that’s delaminating or holding active mold at the insulation level can’t be cleaned in any meaningful way. It needs replacement. Our video inspection gives you the evidence you need to make that call, and it gives your insurer the documentation they’ll ask for if a claim is involved. We use Rotobrush and Nikro equipment for inspection and cleaning, and we’ll show you the footage before we write a single number down.

What happens when you call
- 1
A real person answersNo phone trees - you reach a local pro.
- 2
You get an upfront price rangeHonest numbers before anyone is dispatched.
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A background-checked tech heads outLicensed & insured, dispatched right away.
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You approve before work beginsNothing starts until you say go.
Before
AfterTrusted Brands We Service in Bonita Springs
We work on every major duct and HVAC configuration found in Bonita Springs homes, and we carry the professional-grade tools to do the job right: Rotobrush for agitation, Nikro for negative-air source removal, and Guardsman for antimicrobial treatment where warranted. We don’t use consumer-grade equipment, and we don’t ask you to take that on faith. Every tool we bring into your home has a manufacturer’s name you can look up before you sign anything. The brands are on the quote. The documentation is in your file.
Common Air Duct Cleaning Problems We See in Bonita Springs Homes

- Post-Ian flood residue in supply boots and lower flex runs. Brackish water from the Imperial River and Spring Creek corridor reached air handlers and duct boots in hundreds of homes. That residue dries, looks like ordinary gray dust, and gets ignored by standard cleaning crews who don’t know what to look for.
- Mold incubation during vacant summers. A snowbird-owned home that sits from May to October with the AC off or heavily throttled creates a greenhouse inside the ducts. Warm attic air, residual humidity, and a sealed system that never moves air. We’ve documented active mycelium growth in flex runs that were installed in 2016.
- Liner degradation from sustained attic heat. Flex duct liner breaks down faster in Bonita Springs than in any market north of I-4. The 130°F+ attic temperatures for six months a year dry out the inner liner, which then releases fibers into the airstream. This is a health consideration, not just a comfort one.
- Skipped air handler and blower motor after flood exposure. The air handler is the heart of the system, and if it wasn’t pulled, cleaned, and dried after Ian, it’s re-contaminating every duct run we clean. A supply-and-return cleaning without an air handler service is half a job. We photograph the handler before and after, same as the ducts.
Pricing for Air Duct Cleaning in Bonita Springs, FL
Here are the numbers, in writing, because that’s how we do business. A basic single-system residential duct cleaning in Bonita Springs runs $450 to $650. A full system clean including supply runs, return runs, air handler, blower motor, evaporator coil, and plenum runs $750 to $1,100 depending on system size and accessibility. Commercial jobs are quoted by square footage and system configuration, typically starting around $900 for a small retail suite. Video inspection is included with every full system clean and available as a standalone service for $150, credited toward the cleaning if you proceed. These are whole-system prices. We don’t quote per vent, and we don’t bait you with a $79 coupon that becomes $900 when the tech arrives. The price we write down before work starts is the price you pay. Call (806) 606-6902 and we’ll put it on paper.
| Service | Bonita Springs Price Range |
|---|---|
| Residential duct cleaning (single system) | $450 - $650 |
| Full system cleaning (ducts, handler, blower, coil) | $750 - $1,100 |
| Commercial duct cleaning (small suite) | $900+ |
| Video inspection (standalone) | $150, credited toward cleaning |
| Free second opinion on any competitor’s written quote | $0 |
We Also Serve Cities Near Bonita Springs

Our crews work throughout Southwest Florida. If you’re in Estero, Lehigh Acres, Fort Myers, or Cape Coral, the same written-price commitment and documented photo record applies. Some of those markets never saw Ian’s water, but they all share the same heat and humidity profile that makes attic duct cleaning a different job than it would be in a northern market. For more about what we do throughout the region, see our Bonita Springs service area page.
Serving Bonita Springs, FL - Our Local Coverage Area
We’re based in the Bonita Springs area and know this community well. Use the map below to see our service coverage - if you’re nearby, we can almost certainly help.
FAQs - Air Duct Cleaning in Bonita Springs

The video camera decides. If the inner liner is intact, joints are sealed, and contamination is on the surface, cleaning with Rotobrush agitation and negative-pressure extraction removes it. If the liner is delaminating, holding water stains, or showing active mold growth at the insulation layer, no cleaning will fix that. Replacement is the only correct answer. We document the condition on camera before and after so you can see exactly why we’re recommending one path or the other. Call (806) 606-6902 to schedule an inspection and get the evidence in your hands.
Because construction after the storm doesn’t mean the ducts were never exposed. Bonita Bay homes built between 2015 and 2022 sat through Ian’s surge, and even homes that didn’t take standing water got weeks of 90%+ humidity with the power out and no air movement. That’s enough time for mold to establish in attic flex runs. Then the house sat empty all summer while attic temperatures baked whatever was growing into the liner. The musty smell on first startup in November is the tell. That’s not dust. That’s a biological contaminant that standard cleaning won’t touch unless the right equipment is used.
Possibly, but only with proper documentation. Insurers want to see NADCA-standard camera evidence showing the contamination, the cleaning process, and the post-cleaning condition. Without that, a claim gets denied and you pay out of pocket twice: once for the inadequate cleaning, then again for the proper one. Our Documented Photo Record was built for this exact scenario. In Pelican Landing last November, we video-inspected a 2015 concrete-block home where Ian’s surge had reached the air handler and supply boots. The Rotobrush agitation and HEPA negative-pressure source removal pulled out brackish residue and visible mycelium from the flex runs, and our post-cleaning camera documentation of intact liner and sealed joints was enough for the owner’s insurer to approve remediation instead of a full duct replacement. We’ll give you the same paper trail.
You need an inspection at minimum. Spanish Wells homes sit from May through October with reduced or no AC, which means duct interiors never dry out and never move air. That’s a mold incubator, especially in flex runs that were exposed to Ian’s humidity if not floodwater. If you haven’t had the ducts looked at since before the storm, the answer is almost certainly yes. We’ll run a camera through the runs, show you what’s there, and quote the cleaning only if cleaning will actually solve it. Turn the AC on first and you may blow spores through the whole house. Call (806) 606-6902 and we’ll inspect first, quote in writing, and clean only what needs cleaning.
Bonita Springs took Ian’s storm surge directly along the Imperial River and Spring Creek corridor, and a huge portion of the housing stock is snowbird-owned and seasonal. Naples and Fort Myers have seasonal residents too, but Bonita Springs has a specific combination: flood-exposed flex ducts plus months of vacancy plus 130°F attic heat. That produces a failure pattern that looks like ordinary dust but is actually brackish residue bound with mold that re-contaminates the system within weeks of a surface-only cleaning. We clean differently here because the problem is different here. Call (806) 606-6902 for a written quote and a camera inspection that shows you exactly what’s in your ducts.
Written by Tomas Reyes, Owner at CleanRun Air Duct Cleaning, serving Bonita Springs since 2013.




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